create_hierarchy: Create hierarchical tree
In joseah/HierscPred: Supervised hierarchical classification for scPred
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Creates a tree object representing a cell-type hierarchy
Usage
1
create_hierarchy(branches)
Arguments
branches
A character vector containing n number of branches.
Each branch corresponds to a cell type. Each level is delimited by "/"
character. For example, the following branch is composed by three levels
and the _terminal_ cell type is pDC: "Myeloid/DC/pDC"
Value
A data.tree object containing the cell type hierarchy
Author(s)
Lieke Michielsen and Jose Alquicira-Hernandez
Examples
1
2
branches <- c("Myeloid/DC/pDC", "Myeloid/DC/cDC")
h <- create_hierarchy(branches)
joseah/HierscPred documentation built on Nov. 25, 2021, 12:20 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
Creates a tree object representing a cell-type hierarchy
Usage
1 | create_hierarchy(branches)
|
Arguments
branches |
A character vector containing |
Value
A data.tree object containing the cell type hierarchy
Author(s)
Lieke Michielsen and Jose Alquicira-Hernandez
Examples
1 2 | branches <- c("Myeloid/DC/pDC", "Myeloid/DC/cDC")
h <- create_hierarchy(branches)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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