josef0731/CDSMutSig: Mapping Coding Sequences between DNA Mutational signatures and Amino Acid Changes

A set of functions which use Ensembl and Bioconductor genome objects to map between given protein sequences to corresponding coding DNA sequences, extract single-amino acid variants (SNVs) and corresponding nucleotide substitutions. Map mutational signatures for all possible substitutions.

Getting started

Package details

MaintainerJoseph Ng <joseph.chifung.ng@gmail.com>
LicenseGPL-3 + file LICENSE
Version0.2.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("josef0731/CDSMutSig")
josef0731/CDSMutSig documentation built on Dec. 21, 2021, 2:19 a.m.