README.md
In josef0731/CDSMutSig: Mapping Coding Sequences between DNA Mutational signatures and Amino Acid Changes
CDSMutSig
CDSMutSig is a R package containing a set of functions to map, given a protein, its coding DNA sequences, all possible amino acid substitutions as well as their corresponding DNA mutational contexts. This allows analysis of different protein-level consequences caused by different mutagenic processes.
Installation
In R:
require(devtools)
install_github("josef0731/CDSMutSig", ref = "main")
Usage
Please see this vignette for examples.
Citation
Ng JCF & Fraternali F. Protein structural consequences of DNA mutational signatures: A meta-analysis of somatic variants and deep mutational scanning data. Manuscript in preparation, 2021.
josef0731/CDSMutSig documentation built on Dec. 21, 2021, 2:19 a.m.
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CDSMutSig
CDSMutSig is a R package containing a set of functions to map, given a protein, its coding DNA sequences, all possible amino acid substitutions as well as their corresponding DNA mutational contexts. This allows analysis of different protein-level consequences caused by different mutagenic processes.
Installation
In R:
require(devtools)
install_github("josef0731/CDSMutSig", ref = "main")
Usage
Please see this vignette for examples.
Citation
Ng JCF & Fraternali F. Protein structural consequences of DNA mutational signatures: A meta-analysis of somatic variants and deep mutational scanning data. Manuscript in preparation, 2021.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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