getMutCodonPos: Get the codon position mutated to yield a given missense...
In josef0731/CDSMutSig: Mapping Coding Sequences between DNA Mutational signatures and Amino Acid Changes
Description
Usage
Arguments
Value
Examples
View source: R/genetic_code_sav.R
Description
Get the codon position mutated to yield a given missense substitution
Usage
1
getMutCodonPos(wt_c, mut_c)
Arguments
wt_c
wild-type codon
mut_c
mutant codon
Value
A integer with value of 1, 2 or 3, corresponding to the position within the codon which is mutated from wt_c to mut_c.
Examples
1
2
3
getMutCodonPos( "ATG", "CTG" ) # return 1
getMutCodonPos( "ATG", "ACG" ) # return 2
getMutCodonPos( "ATG", "ATA" ) # return 3
josef0731/CDSMutSig documentation built on Dec. 21, 2021, 2:19 a.m.
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Description Usage Arguments Value Examples
View source: R/genetic_code_sav.R
Description
Get the codon position mutated to yield a given missense substitution
Usage
1 | getMutCodonPos(wt_c, mut_c)
|
Arguments
wt_c |
wild-type codon |
mut_c |
mutant codon |
Value
A integer with value of 1, 2 or 3, corresponding to the position within the codon which is mutated from wt_c to mut_c.
Examples
1 2 3 | getMutCodonPos( "ATG", "CTG" ) # return 1
getMutCodonPos( "ATG", "ACG" ) # return 2
getMutCodonPos( "ATG", "ATA" ) # return 3
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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