Description Usage Arguments Value
Internal function used to calculate the likelihood of the Pradel CMR model.
1 | pradel_unvd(fec, ext, p, u, n, v, d, minval = 1e-05)
|
fec |
Fecundity in the Pradel model. Either one value or one for each of the n-1 first intervals. |
ext |
Extinction probabilities. Same size as fec. |
p |
Sampling probabilities. |
u, n, v, d |
Values for number observations, each of length equal to number of intervals. u - number of taxa first observed, n - number of taxa observed, v - number of taxa observed for last time. d should be vector of 0's. |
minval |
Minimum probabilities used for calculations. No probabilities are allowed be be smaller than minval or larger than 1-minval. Defaults to 1e-5. |
Returns $LogL (log likelihood), and $Ll.numerator and $Ll.denominator.
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