plot_scc_dt: plot_scc_dt
In jrboyd/seqqc:
Description
Usage
Arguments
Value
Examples
View source: R/functions_plot.R
Description
plot strand cross correlation (SCC) info
Usage
1
plot_scc_dt(scc_dt)
Arguments
scc_dt
output from make_scc_dt
Value
list of ggplots relevant to SCC
Examples
1
2
3
4
5
6
7
bam_files = dir(system.file("extdata", package = "seqqc"), pattern = "^M.+bam$", full.names = TRUE)
query_dt.bam = make_dt(bam_files)
query_gr = CTCF_in_10a_overlaps_gr
scc_dt = make_scc_dt(query_dt.bam, query_gr)
plot_scc_dt(scc_dt)
jrboyd/seqqc documentation built on March 20, 2021, 2:04 p.m.
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Description Usage Arguments Value Examples
View source: R/functions_plot.R
Description
plot strand cross correlation (SCC) info
Usage
1 | plot_scc_dt(scc_dt)
|
Arguments
scc_dt |
output from |
Value
list of ggplots relevant to SCC
Examples
1 2 3 4 5 6 7 | bam_files = dir(system.file("extdata", package = "seqqc"), pattern = "^M.+bam$", full.names = TRUE)
query_dt.bam = make_dt(bam_files)
query_gr = CTCF_in_10a_overlaps_gr
scc_dt = make_scc_dt(query_dt.bam, query_gr)
plot_scc_dt(scc_dt)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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