QcConfigFeatures: QcConfigFeatures

In jrboyd/seqqc:

Description

QcConfigFeatures

Usage

QcConfigFeatures(
  file_paths,
  groups = NULL,
  group_names = NULL,
  group_colors = NULL,
  n_peaks = 5000,
  min_fraction = 0,
  min_number = 1
)

Arguments

file_paths	character paths to files
groups	numeric vector of group assignments. 1 is first item in group_names, 2 is second, etc. Default is seq_along(file_path)
group_names	vector of group names to assign from according to groups
group_colors	vector of colors to use per group
n_peaks	number of peaks to subset for
min_fraction	A numeric between 0 and 1 specifying the fraction of grs that must overlap to be considered consensus.
min_number	An integer number specifying the absloute minimum of input grs that must overlap for a site to be considered consensus.

Value

a QcConfigFeatures object

Examples

QcConfigFeatures(c("A", "B"))

jrboyd/seqqc documentation built on March 20, 2021, 2:04 p.m.