autoplot.biclustermd_sse: Plot sums of squared errors (SSEs) consecutive biclustering...

In jreisner/sparseBiclustering: Biclustering with Missing Data

Description

Creates a ggplot of the decrease in SSE recorded in biclustermd::bicluster().

Usage

## S3 method for class 'biclustermd_sse'
autoplot(object, ...)

Arguments

object	Object of class "biclustermd_sse" with columns "Iteration" and "SSE"
...	Arguments to pass to ggplot2::geom_point()

Value

A ggplot object.

Examples

data("synthetic")

bc <- biclustermd(synthetic, col_clusters = 3, row_clusters = 2,
                miss_val = mean(synthetic, na.rm = TRUE),
                miss_val_sd = sd(synthetic, na.rm = TRUE),
                col_min_num = 2, row_min_num = 2,
                col_num_to_move = 1, row_num_to_move = 1,
                max.iter = 10)
bc
autoplot(bc$SSE)

jreisner/sparseBiclustering documentation built on June 22, 2021, 12:54 p.m.