folds.0: Identify zero-fold degenerate positions (ie non-synonymous...

View source: R/picalc.R

folds.0R Documentation

Identify zero-fold degenerate positions (ie non-synonymous sites) from the gene models.

Description

Identify zero-fold degenerate positions (ie non-synonymous sites) from the gene models.

Usage

folds.0(gff)

Arguments

gff.file

The input gff3 file with gene models. Recommended input: high quality gene models from filter.hq.genes

Value

A data frame containing coordinates of non-synonymous positions.


jsalojar/PiNSiR documentation built on Nov. 1, 2023, 1:47 p.m.