folds.4: Identify four-fold degenerate positions (4dtv) from the gene...
In jsalojar/PiNSiR: What the Package Does (One Line, Title Case)
folds.4 R Documentation
Identify four-fold degenerate positions (4dtv) from the gene models.
Description
Identify four-fold degenerate positions (4dtv) from the gene models.
Usage
folds.4(gff, peptide.fasta)
Arguments
peptide.fasta
Path to the input fasta file with protein sequences of the gene models.
gff.file
The input gff3 file with gene models. Recommended input: high quality gene models from filter.hq.genes
Value
A data frame containing coordinates of 4dtv sites.
jsalojar/PiNSiR documentation built on Nov. 1, 2023, 1:47 p.m.
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| folds.4 | R Documentation |
Identify four-fold degenerate positions (4dtv) from the gene models.
Description
Identify four-fold degenerate positions (4dtv) from the gene models.
Usage
folds.4(gff, peptide.fasta)
Arguments
peptide.fasta |
Path to the input fasta file with protein sequences of the gene models. |
gff.file |
The input gff3 file with gene models. Recommended input: high quality gene models from filter.hq.genes |
Value
A data frame containing coordinates of 4dtv sites.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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