chlcoef | R Documentation |
Calculate extracted versus fluoresced chlorophyll coefficients
chlcoef(yearmon, varlist = NA, remove.flags = TRUE, overwrite = FALSE, fdir = getOption("fdir"), polypcut = 0.6, corcut = 0.7, streamcov = 0.5, checkvif = TRUE, logtransform = FALSE)
yearmon |
numeric date of survey |
varlist |
character vector of variable names to use in model |
remove.flags |
logical trim dataset based on flags? |
overwrite |
logical overwrite previous coefficients? |
fdir |
file.path to data folder |
polypcut |
numeric used to switch to a polynomial regression fit |
corcut |
numeric used to screen bad variables with bad correlation coefficients |
streamcov |
numeric percentage of non-missing streaming data used to exclude variables under consideration |
checkvif |
logical check final equation for multicollinearity using VIF? |
logtransform |
logical |
this function should be interactive
## Not run: chlcoef(201308) chlcoef(201606, varlist = c("chl.ug.l", "turb.ntu", "phycoc", "c6cdom", "c6chl", "phycoe"), corcut = 0.75) ## End(Not run)
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