chlmap: Create chlorophyll maps

In jsta/DataflowR: Toolbox for Processing and Viewing Underway Dataflow Output

Create chlorophyll maps

Description

Create a chlorophyll concentration surface using streaming data and regression against extracted chlorophyll

Usage

chlmap(yearmon, remove.flags = TRUE, stream.qa = TRUE,
  fdir = getOption("fdir"))

Arguments

yearmon	numeric date in yyyymm format
remove.flags	logical Use QA'd grab data?
stream.qa	logical Use QA'd streaming data?
fdir	file.path to data folder

Details

A new interpolation is run after calculating an extracted chlorophyll for all streaming observations. Calculated values that exceed the maximum observed grab sample concentration are discarded.

Value

An extracted chlorophyll surface and an updated FullDataSet file

Author(s)

Jemma Stachelek

Examples

## Not run: 
res <- chlmap(yearmon = 201502)

## End(Not run)

jsta/DataflowR documentation built on Sept. 27, 2022, 11:13 p.m.