The peatcollapse
package contains functions to clean and assemble the various Peat Collapse project datasets into consistent summary files. These datasets include:
Conductivity, salinity, and temperature data collected onsite
via YSI sonde
Soil redox-potential readings collected onsite
Water quality chemistry samples processed in the SFWMD lab
Phosphorus samples processed in the SFWMD Everglades lab
Sulfide samples processed at the FBSIC lab
The ultimate goal is to create seperate "database" summary files for the Field Study and Key Largo Mesocosm Experiments. These summary files should be stand-alone and saved in an open non-proprietary file format such as csv.
peatcollapse
package```{r eval=FALSE} install.packages(c("RSQLite", "readxl", "reshape2", "DBI"))
`devtools::install_git("http://gitlab.com/jsta/peatcollapse.git",`
` credentials = git2r::cred_user_pass("<username>",` ` getPass::getPass()))`
## Assembling Databases
From within the peat-collapse data directory:
```{r eval=FALSE}
field <- assemble_field(tofile = FALSE)
meso <- assemble_meso(tofile = FALSE)
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.