assemble_meso: Assemble mesocosm data file from onsite and lab data

In jsta/peatcollapse: Cleaning and Assembly of Peat Collapse Data

Description

Assemble mesocosm data file from onsite and lab data

Usage

assemble_meso(experiment = "soilonly", onsitepath = file.path("Raw",
  "onsite"), ppath = file.path("Raw", "lab", "phosphorus", ""),
  sulfpath = file.path("Raw", "lab"), eddpath = file.path("Raw", "lab",
  "EDD"), tofile = FALSE)

Arguments

experiment	character choice of "soilplant" or "soil"
onsitepath	character folder.path to folder containing onsite data
ppath	character folder.path to file containing phosphorus data
sulfpath	character folder.path to folder containing sulfide data
eddpath	character folder.path to folder containing edd data
tofile	logical print results to file?

Examples

## Not run: 
meso <- assemble_meso(eddpath = file.path("Raw", "lab", "EDD"),
sulfpath = file.path("Raw", "lab"), tofile = FALSE)

meso <- assemble_meso(experiment = "soilonly")
meso <- assemble_meso(experiment = "soilonly", ppath = file.path("Raw", "lab", "phosphorus", "Salt_P_Sept_Dec2014_Mesocosm.csv"))
meso <- assemble_meso(experiment = "soilplant", ppath = file.path("Raw", "lab", "phosphorus", "Salt_P_Feb_Sept2015_Mesocosm.csv"))

## End(Not run)

jsta/peatcollapse documentation built on May 15, 2019, 5 a.m.