| ci-adjust | CI Adjust |
| ci-assessment | Assessment of CI methods |
| ci-utils | CI Utils |
| colorscales | Rariant color scales |
| convert-utils | Position converters |
| evidence-heatmap | Variant Evidence Heatmap |
| mismatch-plot | Mismatch plot from BAM files |
| mismatch-utils | Tally processing low-level functions |
| multi-utils | Multi call processing |
| plot-cis | Plotting Functions |
| prop-cis | Confidence Interval Functions |
| prop-tests | Testing Functions |
| rariant | Rariant calling functions |
| Rariant-package | Rariant package |
| shiny | Interactive inspection |
| split-sample | Split Sample for Binomial Data |
| tally | Tally a genomic region |
| yesnomaybe | Determine Variant Evidence |
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