| bin | bin : Transformation of a continuous data vector into a... |
| cbind.na | cbind.na : cbind.na |
| colSD | colSD : SD for each column of a matrix |
| colVar | colVar : variance for each column of a matrix |
| cor.ld | cor.ld : Correlation calculation with nearest neighbor in... |
| cor.ld.pas | cor.ld.pas : Correlation calculation with nearest neighbor in... |
| cor.paired | cor.paired : Correlation calculation with nearest neighbor |
| cor.pas | cor.pas : Correlation calculation with nearest neighbor (with... |
| F1 | F1 : Calcul F1 score for a simulation (on effect sizes) |
| F1.LD | F1.LD : Calcul F1 score for a simulation (on effect sizes),... |
| F1.SCORE.FOR.BMA | F1.SCORE.FOR.BMA : F1 score for bigmma package (for... |
| F1.SCORE.FOR.HIMA | F1.SCORE.FOR.HIMA : F1 score for HIMA package (for... |
| F1.SCORE.FOR.SPARSE | F1.SCORE.FOR.SPARSE : F1 score for sparse LFMM package (for... |
| f1.score.prs | f1.score.prs : Calcul of the F1 score and the Polygenic Risk... |
| fn | fn : imput mean for NA data |
| gemma | gemma : GEMMA programme in R |
| gemma2 | gemma2 : GEMMA programme in R (better version of gemma) |
| lfmm_lasso2 | lfmm_lasso2 : lfmm lasso with no scale on data |
| lfmm_ridge2 | lfmm_ridge2 : lfmm ridge with no scale on data |
| med.test | med.test : The Sobel mediation test |
| panel.cor | panel.cor : pairs function |
| panel.hist | panel.hist : pairs function |
| pwer.effect | pwer.effect : Calculate the power and the calibration of... |
| rank.pwer | rank.pwer : Calculate the power and the calibration of... |
| rank.pwer.sparse | rank.pwer.sparse : Calcul the AUC of the Hits Rank Curve for... |
| rbind.na | rbind.na : rbind.na |
| refactor2 | refactor2 : fonction refactor |
| r_mediation | r_mediation : function to simulate DNA methylation data for... |
| r_mediation_cell_type | r_mediation_cell_type : function to simulate DNA methylation... |
| r_mediation_natural | r_mediation_natural : function to simulate DNA methylation... |
| r_mediation_real_cell_type | r_mediation_real_cell_type : function to simulate DNA... |
| r_mediation_real_gene | r_mediation_real_gene : function to simulate DNA methylation... |
| RMSE | RMSE : Calcul Root Square Mean Error |
| rowSD | rowSD : SD for each row of a matrix |
| rowVar | rowVar : variance for each row of a matrix |
| simulator_ewas | simulator_ewas : function to simulate DNA methylation data... |
| simulator_ewas_real | simulator_ewas_real : function to simulate DNA methylation... |
| sob.parallel | sob.parallel : The Sobel mediation test for high dimension |
| write.gemma.covariates | write.gemma.covariates |
| write.gemma.geno | write.gemma.geno |
| write.gemma.map | write.gemma.map |
| write.gemma.pheno | write.gemma.pheno |
