compare.MSstats: Perform an MSstats comparison

In jwinget/mrmr: Functions to improve MRM data processing with MSstats

Description

Performs MSstats differential analysis. Saves result to disk and reloads unless recompute is True

Usage

compare.MSstats(processed.features, comparison.matrix,
  filepath = "MSstats_comparisons.rds", recompute = F)

Arguments

processed.features	Object with normalized data. Can be produced with process.MSstats()
comparison.matrix	A comparison matrix as described in MSstats user guide.
recompute	Boolean on whether to recompute comparisons. Default is False
file.path	Path to save the resulting comparison data object

Value

An object containing comparison results

Examples

pd.comparisons <- compare.MSstats(rd.proposed, comparisons, recompute=F)

jwinget/mrmr documentation built on Nov. 4, 2019, 3:28 p.m.