scale_x_hypo_LG: Format genome wide x axis

In k-hench/hypogen: Provides Hypoplectrus PopGen Data and Functions

Description

scale_x_hypo_LG adjusts the x axis to match the hamet genome.

Usage

scale_x_hypo_LG(
  ...,
  name = "",
  expand = c(0, 0),
  breaks = (hypo_karyotype$GSTART + hypo_karyotype$GEND)/2,
  labels = 1:24,
  position = "top"
)

Arguments

...	parameters passed to ggplot2::scale_x_continuous()
name	string/ expression, x axis title
expand	numeric vector of length 2
breaks	numeric vector, x axis breaks
labels	string vector, x axis labels
position	string ("top"/ "bottom"), axis placement

Details

Each of the LGs is labelled with on tick which is placed in the center of the LG. The should be combined with hypogen::geom_hypo_LG

See Also

geom_hypo_LG, scale_color_hypo_LG

Examples

ggplot() +
  geom_hypo_LG() +
  scale_fill_hypo_LG_bg() +
  scale_x_hypo_LG() +
  coord_cartesian(ylim = c(0, 1)) +
  theme_hypo()

k-hench/hypogen documentation built on April 14, 2021, 1:44 p.m.