Man pages for kaiyaprovost/subsppLabelR
Subspecies Labeled Occurences Generator
| cleanByEnvironment | Clean points by the environment |
| convertRelToPresAbs | Convert relative raster to presence/absence raster |
| createAssignedSubspecies | Species Occurrences to Subspecies Occurrences |
| createPcaToCompare | Generating a pca for comparison across niches. |
| densityMapToPolygons | Convert Density Maps to Polygons |
| densityRasterRemoveIntersection | Remove Raster Intersections |
| detectSpatialOutliers | Outlier Detection |
| findClosestPolygon | Check for Subspecies Contiguity |
| flagPolygonOverlap | Flag Bad Polygon Overlaps |
| generateBackgroundForPCA | Generating background points for a pca |
| generateBackgroundPerSpecies | Generating background points for a species |
| labelSubspecies | Convert Occurence List to Labeled Dataframe |
| localitiesToNicheMath | Wrapper for calculating niche math |
| locatePolygonPoints | Point to Polygon Locator |
| locateRasterPoints | Point to Raster Locator |
| loopFindClusters | Loop to find recursive clusters and returns list of clusters |
| mgdad | Outlier Detection |
| mgdad_px | Outlier Probability |
| nearestNeighborCleanup | Clean points via nearest neighbors |
| pairwiseNicheEquivalence | Test for pairwise niche equivalence |
| pairwiseNicheOverlap | Make pairwise niche overlaps |
| polygonTrimmer | Polygon Trimmer |
| presAbs | Calculate presence/absence raster from two density rasters |
| recurseNeighbors | Recursively find neighbors |
| relOverlap | Calculate relative overlap raster from two density rasters |
| spThinBySubspecies | Thinning points by subspecies |
| subspeciesDensityMap | Generate Subspecies Density Maps |
| subspeciesMatchChecker | Check Subspecies Matches and Labels |
| subspeciesOccQuery | Pull Subspecies Occurrences |
| trimPolygonsByOverlap | Remove Overlapping Polygons |
