spThinBySubspecies: Thinning points by subspecies

In kaiyaprovost/subsppLabelR: Subspecies Labeled Occurences Generator

Thinning points by subspecies

Description

This function takes cleaned localities and applies a thinning algorithm so that points are no closer than the thin.par km. Does this per species, or whatever level of taxonomy is represented in the species column

Usage

spThinBySubspecies(
  loc_good_clean,
  thin.par = 10,
  reps = 1,
  lat.col = "latitude",
  long.col = "longitude",
  spec.col = "assigned",
  verbose = T,
  write.files = T
)

Arguments

loc_good_clean	Cleaned localities with associated Env data
thin.par	The amount of km points should not be closer than
reps	How many times to repeat the thinning
lat.col	the column name for latitude
long.col	The column name for longitude
spec.col	The column name for species

Examples

loc_good_clean = cleanByEnvironment(Env, loc)
locs_thinned = spThinBySubspecies(loc_good_clean,thin.par=10,reps=1,lat.col="latitude",long.col="longitude",spec.col="assigned")

kaiyaprovost/subsppLabelR documentation built on March 17, 2024, 5:09 p.m.