tests/testthat/_snaps/update.md

In kaneplusplus/basket: Basket Trial Analysis

Update works.

Code
  summary(update_p0(mh1, 0.25))
Output

  -- The MEM Model Call ----------------------------------------------------------

  mem_mcmc(responses = vemu_wide$responders, size = vemu_wide$evaluable, 
      name = vemu_wide$baskets, p0 = c(0.15, 0.15, 0.15, 0.2, 0.15, 
          0.15), mcmc_iter = 10, mcmc_burnin = 10)

  -- The Basket Summary ----------------------------------------------------------

  The Null Response Rates (alternative is greater):
                 NSCLC CRC (vemu) CRC (vemu+cetu) Bile Duct ECD or LCH   ATC
  Null           0.250      0.250           0.250     0.250      0.250 0.250
  Posterior Prob 0.873      0.068           0.002     0.758      0.793 0.746

  Posterior Mean and Median Response Rates:
         NSCLC CRC (vemu) CRC (vemu+cetu) Bile Duct ECD or LCH   ATC
  Mean   0.359      0.113           0.053     0.319      0.330 0.311
  Median 0.349      0.096           0.042     0.332      0.322 0.308

  Highest Posterior Density Interval with Coverage Probability 0.95:
              NSCLC CRC (vemu) CRC (vemu+cetu) Bile Duct ECD or LCH   ATC
  Lower Bound 0.177      0.000           0.000     0.088      0.150 0.084
  Upper Bound 0.562      0.268           0.135     0.516      0.523 0.512

  Posterior Effective Sample Size:
    NSCLC CRC (vemu) CRC (vemu+cetu) Bile Duct ECD or LCH    ATC
   22.412     21.181          41.655    17.932     23.163 17.608

kaneplusplus/basket documentation built on July 31, 2023, 6:46 p.m.