aedes | Data on Aedes aegypti |
calc.dist | Calculate simple distance matrix |
cluster.stat | Calculate measure of quality of inferred clusters |
comp.fams | Compare two sets of clusters |
cutoff | Calculate cutoff for clustering with RAPD markers |
cutoff.llr | Calculate cutoff for clustering with RAPD markers |
dist.image | Plot distance matrix |
fingers | Infer clusters of related individuals |
fingers-internal | Internal fingers functions |
freq | Estimate RAPD allele frequencies |
llrdist | Calculate distance matrix based on log likelihood ratio |
pull.markers | Extract markers with allele frequencies in specified range |
shiff1 | Schistosome data |
shiff2 | Schistosome data |
shiff3 | Schistosome data |
simrapd | Simulate RAPD data |
simulfams | Simulate RAPD data |
true.fams | Identify the true clusters |
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