strip.partials: Strip partially informative genotypes
In kbroman/qtl: Tools for Analyzing QTL Experiments
strip.partials R Documentation
Strip partially informative genotypes
Description
Replace all partially informative genotypes (e.g., dominant markers in
an intercross) with missing values.
Usage
strip.partials(cross, verbose=TRUE)
Arguments
cross
An object of class cross. See
read.cross for details.
verbose
If TRUE, print the number of genotypes removed.
Value
The same class cross object as in the input, but with partially
informative genotypes made missing.
Author(s)
Karl W Broman, broman@wisc.edu
See Also
plotMissing, plotInfo
Examples
data(listeria)
sum(nmissing(listeria))
listeria <- strip.partials(listeria)
sum(nmissing(listeria))
kbroman/qtl documentation built on Jan. 13, 2024, 10:14 p.m.
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| strip.partials | R Documentation |
Strip partially informative genotypes
Description
Replace all partially informative genotypes (e.g., dominant markers in an intercross) with missing values.
Usage
strip.partials(cross, verbose=TRUE)Arguments
cross |
An object of class |
verbose |
If TRUE, print the number of genotypes removed. |
Value
The same class cross object as in the input, but with partially
informative genotypes made missing.
Author(s)
Karl W Broman, broman@wisc.edu
See Also
plotMissing, plotInfo
Examples
data(listeria)
sum(nmissing(listeria))
listeria <- strip.partials(listeria)
sum(nmissing(listeria))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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