summary.qtl: Print summary of a QTL object

In kbroman/qtl: Tools for Analyzing QTL Experiments

Print summary of a QTL object

Description

Print summary information about a qtl object.

Usage

## S3 method for class 'qtl'
summary(object, ...)

Arguments

object	An object of class qtl, created by makeqtl.
...	Ignored at this point.

Value

An object of class summary.qtl, which is just a data.frame containing the chromosomes, positions, and number of possible genotypes for each QTL.

Author(s)

Karl W Broman, [e-mail]

See Also

makeqtl

Examples

data(fake.f2)

# take out several QTLs and make QTL object
qc <- c(1, 6, 13)
qp <- c(25.8, 33.6, 18.63)
fake.f2 <- subset(fake.f2, chr=qc)

fake.f2 <- calc.genoprob(fake.f2, step=2, err=0.001)
qtl <- makeqtl(fake.f2, qc, qp, what="prob")

summary(qtl)

kbroman/qtl documentation built on Jan. 13, 2024, 10:14 p.m.