Description Usage Arguments Value See Also Examples
Read genotype probabilities from database
1 2 | read_probs(db, chr = NULL, pos = NULL, markers = NULL,
url = "mongodb://localhost")
|
db |
Name of database |
chr |
Single chromosome to read. |
pos |
Optional length-2 vector specifying an interval of positions to read. |
markers |
Optional vector of marker names to read. If
|
url |
URL for mongo server |
Genotype probabilities, as an object of class "calc_genoprob"
.
1 2 3 4 5 6 7 8 | ## Not run:
pr <- read_probs("iron_probs", chr="5", url="mongodb://localhost")
pr <- read_probs("iron_probs", chr="5", pos=c(50, 75))
pr <- read_probs("iron_probs", markers=c("D5Mit11", "c5.loc18", "c5.loc18.5"))
## End(Not run)
|
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