plot_goelz: Plot a Goelz Triangle experimental design

In kevinwolz/sysdesign: An R Toolbox for Creating & Analyzing Systematic Experimental Designs in Biology

Description

Plots a Goelz Triangle experimental design.

Usage

plot_goelz(
  data,
  size = 4,
  fill = "species",
  color = "border",
  label = "none",
  fill.discrete.palette = c("grey50", "white", "#E69F00", "#56B4E9", "#009E73",
    "#F0E442", "#0072B2", "#D55E00", "#CC79A7"),
  color.discrete.palette = c("black", "green", "red", "blue", "orange", "purple"),
  fill.continuous.palette = ggplot2::scale_fill_viridis_c(option = "magma"),
  color.continuous.palette = ggplot2::scale_color_viridis_c(option = "magma"),
  corners = FALSE,
  guides = FALSE,
  legend = TRUE
)

Arguments

data	An object of class 'goelz' created via goelz with split = FALSE.
size	A numeric value indicating point size.
fill	One of "species", "zone", or "border", indicating the column of data that specifies the point fill color.
color	One of "species", "zone", or "border", indicating the column of data that specifies the point border color. Use "none" for no variation in point borders.
label	A character string indicating the column name of data to use for labels on each point. Use "none" for no labels.
fill.discrete.palette	A character vector indicating the color palette of used for point fill.
color.discrete.palette	A character vector indicating the color palette of used for point borders.
fill.continuous.palette	ggplot2 function for a continuous color palette used for point fill.
color.continuous.palette	ggplot2 function for a continuous color palette used for point color
corners	Logical indicating whether or not to plot red X's at each corner of the rectangle containing the design.
guides	Logical indicating whether or not to plot red +'s as guides at the extremes of each row in the design.
legend	Logical indicating whether or not to include a legend for fill and color values.

Value

A ggplot2 object.

Author(s)

Kevin J Wolz, [e-mail]

See Also

Other plot functions: plot_fitness_trajectory(), plot_nelder_biculture_competition(), plot_nelder()

Examples

dat <- goelz(N = 35, reps = 1, split = FALSE)
plot_goelz(data = dat)

kevinwolz/sysdesign documentation built on June 13, 2020, 1:35 a.m.