Man pages for kevinzhongxu/CasOligo
A R package to search the gRNA-target-site oligo for designing the taxon-specific guide RNA used for CRISPR-Cas Selective Amplicon Sequencing (CCSAS) to assess the eukaryotic microbiome of hosts (e.g. metazoans, plant)
| cas9.gRNA.oligo1 | A cas9.gRNA.oligo1 Function |
| cas9.gRNA.oligo1m | A cas9.gRNA.oligo1m Function |
| cas9.gRNA.oligo2 | A cas9.gRNA.oligo2 Function |
| pacific_oyster_18S_V4 | pacific_oyster_18S_V4: |
| pacific_oyster_18S_V4_3seqs | pacific_oyster_18S_V4_3seqs: |
| prb1 | prb1: |
| prb2 | prb2: |
| prb.score | prb.score: |
| search.db.byid | A search.db.byid Function |
| search.db.byname | A search.db.byname Function |
| silva_v119_18S_99rep_V4 | silva_v119_18S_99rep_V4: |
