get_germplasm_list: Get the germplasm list of the current active study

In khaled-alshamaa/QBMS: Query the Breeding Management System(s)

Get the germplasm list of the current active study

Description

This function will retrieve the germplasm list of the current active study as configured in the internal state object using 'set_study()' function.

Usage

get_germplasm_list()

Value

a data frame of the study germplasm list

Author(s)

Khaled Al-Shamaa, [e-mail]

See Also

login_bms, set_crop, set_program, set_trial, set_study

Examples

if(interactive()) {
# config your BMS connection
set_qbms_config("https://bmsdev-brapi.ibp.services/ibpworkbench")

# login using your BMS account (interactive mode)
# you can pass BMS username and password as parameters (batch mode)
login_bms()

set_crop("maize")

# select a breeding program by name
set_program("MC Maize")

# select a specific study/trial by name
set_trial("2018 PVT")

# select a specific environment/location dataset
set_study("2018 PVT Environment Number 1")

# retrieve the germplasm list of the selected environment/location
germplasm <- get_germplasm_list()
}

khaled-alshamaa/QBMS documentation built on Jan. 27, 2024, 6:40 a.m.