filter_signatures_only_location: Function to extract signature counts for position along the...

Description Usage Arguments Value

View source: R/filter_signatures_only_location.R

Description

This function can be used by the user to extract the counts data for positions of the mutation signatures along the read length.

Usage

1
filter_signatures_only_location(mat, max_pos = 20, flanking_bases = 1)

Arguments

mat

The matrix of the signature counts obtained by aggregate_bin_counts or club_signature_counts functions.

max_pos

The highest position along the read from the start for which the counts are to be extracted.

flanking_bases

The number of flanking bases in the signatures

Value

Returns a filtered matrix of signature counts for positions along the read length.


kkdey/aRchaic documentation built on Aug. 17, 2018, 3:27 a.m.