A dataset containing single cell RNA-seq data from mouse cortex and hippocampus due to Zeisel et al (2015)
Data is an
ExpressionSet object. The
exprs slot contains the gene read counts in a gene
by sample matrix with 19968 genes and 3005 samples from different
parts or cell types of mouse cortex and hippocampus.
phenoData slot contains meta information of the samples
pertaining to tissue level and cell type level information along
with age, sex information of the subjects these cells have been
featureData slot contains row information
which are usually ensemebl gene ID or gene symbols.
Returns an ExpressionSet object for the sequencing data
Amit Zeisel, Ana B Munoz-Manchado, Simone Codeluppi, Peter L<c3><b6>nnerberg, Gioele La Manno, Anna Jur<c3><a9>us, Sueli Marques, Hermany Manguba, Liqun He, Christer Betsholtz, Charlott Rolny, Goncalo Castelo-Branco, Jens Hjerling-Leffler, & Sten Linarsson. Cell types in the mouse cortex and hippocampus revleaed by single-cell RNA-seq. Science 34: 6226, 1138-1142 (2015) DOI:10.1126/science.aaa1934
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