as_igraph: Convert gene list to igraph object
In kkmann/pwcuratr: Functional Pathway Cluster Curation tool
Description
Usage
Arguments
Value
Examples
Description
Convert a character vector of ensembl gene IDs to an igraph object using the
pre-stored gene-gene interactions as undirected edges.
Interactions can be filtered by their evidence score.
Usage
1
as_igraph(genes, minscore = 0)
Arguments
genes
character vector of valid ensembl gene IDs (no version suffix)
minscore
numeric between 0 and 1, minimal score for gene-gene
interactions to be used
Value
igraph object
Examples
1
kkmann/pwcuratr documentation built on March 7, 2020, 2 a.m.
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Description Usage Arguments Value Examples
Description
Convert a character vector of ensembl gene IDs to an igraph object using the pre-stored gene-gene interactions as undirected edges. Interactions can be filtered by their evidence score.
Usage
1 | as_igraph(genes, minscore = 0)
|
Arguments
genes |
character vector of valid ensembl gene IDs (no version suffix) |
minscore |
numeric between 0 and 1, minimal score for gene-gene interactions to be used |
Value
igraph object
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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