viewRules: View rules in IF-THEN form.

In komorowskilab/R.ROSETTA: R.ROSETTA: an interpretable machine learning framework

Description

Display rules in the IF-THEN form. Prints the basic rule statistics.

Usage

viewRules(rules, setLabels=FALSE, labels=c("down","nochange", "up"))

Arguments

rules	A data frame of rule table in a form of rosetta $main output.
setLabels	Logical. If TRUE the new discretization labels can be applied. Default is FALSE.
labels	A character vector. New label names for replacing discretization states.

Value

output

A data frame containing IF-THEN rules and statistics: rule length, RHS accuracy, RHS support, and rule p-value from hypergeometric distribution.

Author(s)

Mateusz Garbulowski

Examples

library(R.ROSETTA)
set.seed(1)

out <- rosetta(autcon)
rules <- out$main

IfThenRules <- viewRules(rules)

#change 1,2,3 gene levels into down,nochange,up
IfThenRulesDNU <- viewRules(rules, setLabels=TRUE, labels=c("down","nochange", "up"))

komorowskilab/R.ROSETTA documentation built on April 5, 2021, 9:41 a.m.