Description Usage Arguments Value
Helper to get annotation list from a physeq object
1 | get_annotation(physeq, annotation_names = NULL)
|
physeq |
A phyloseq object with a nonempty sample data slot |
annotation_names |
A character vector giving the names of sample data columns to extract |
annotation_interaction A list containing the following elements $annotation: The columns of the sample_data data.frame requested from annotation_names $interaction_label: The factor vector containing all combinations of levels in the annotation variables.
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