Description Usage Arguments Value
This creates a phyloseqExtend object from the multiple sources of data common in microbiome experiments.
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otu_table_object |
An object of class otu_table, to incorporate into the phyloseqExtend object. Defaults to NULL. |
sample_data_object |
An object of class sam_data, to incorporate into the phyloseqExtend object. Defaults to NULL. |
phy_tree_object |
An object of class phylo, to incorporate into the phyloseqExtend object. Defaults to NULL. |
refseq_object |
An object of class refseq, to incorporate into the phyloseqExtend object. Defaults to NULL. |
spectra_object |
An object of class spectra, to incorporate into the phyloseqExtend object. Defaults to NULL. |
phyloseqExtend_object An object of class phyloseqExtend, with slots containing each of the input data objects, and NULL for potential but unoccupied slots.
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