getMarkers: getMarkers
In kritikakarri/bigSCale: A framework for the analysis of single cell data (RNA-seq and ATAC-seq) including clustering,phenotyping,pseudotime and inferring gene regulatory networks.
Description
Usage
Arguments
Value
Examples
Description
Retrives a 2D list containing the markers of different specificity for each cluster.
For more information check the online tutorial at www.github.com
Usage
1
getMarkers(object)
Arguments
sce
object of the SingleCellExperiment class.
Value
2D list, each row is a cluster, each column is a level.
Examples
1
Mlist=getMarkers(sce)
kritikakarri/bigSCale documentation built on Dec. 21, 2021, 7:47 a.m.
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Description Usage Arguments Value Examples
Description
Retrives a 2D list containing the markers of different specificity for each cluster. For more information check the online tutorial at www.github.com
Usage
1 | getMarkers(object)
|
Arguments
sce |
object of the SingleCellExperiment class. |
Value
2D list, each row is a cluster, each column is a level.
Examples
1 | Mlist=getMarkers(sce)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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