toCytoscape: bigscale.toCytoscape
In kritikakarri/bigSCale: A framework for the analysis of single cell data (RNA-seq and ATAC-seq) including clustering,phenotyping,pseudotime and inferring gene regulatory networks.
Description
Usage
Arguments
Examples
Description
bigscale.toCytoscape
Usage
1
toCytoscape(G, file.name)
Arguments
G
The graph in igraph format previoulsy calculated with compute.network
file.name
Directory and/or name of the Cytoscape file
Examples
1
bigscale.toCytoscape(G,'graph.json')
kritikakarri/bigSCale documentation built on Dec. 21, 2021, 7:47 a.m.
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Description Usage Arguments Examples
Description
bigscale.toCytoscape
Usage
1 | toCytoscape(G, file.name)
|
Arguments
G |
The graph in igraph format previoulsy calculated with compute.network |
file.name |
Directory and/or name of the Cytoscape file |
Examples
1 | bigscale.toCytoscape(G,'graph.json')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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