otu.matrix: otu_table to matrix
In kstagaman/phyloseqCompanion: Provides additional functions to work with phyloseq objects
otu.matrix R Documentation
otu_table to matrix
Description
Extract otu_table from a phyloseq object and turn it into a matrix
Usage
otu.matrix(ps, force.taxa.cols = TRUE)
Arguments
ps
a phyloseq object
See Also
as, phyloseq, otu_table
Examples
data(example_phyloseq)
otu.mat <- otu.matrix(example_phyloseq)
View(otu.mat)
kstagaman/phyloseqCompanion documentation built on Aug. 26, 2022, 5:07 a.m.
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| otu.matrix | R Documentation |
otu_table to matrix
Description
Extract otu_table from a phyloseq object and turn it into a matrix
Usage
otu.matrix(ps, force.taxa.cols = TRUE)
Arguments
ps |
a phyloseq object |
See Also
as, phyloseq, otu_table
Examples
data(example_phyloseq) otu.mat <- otu.matrix(example_phyloseq) View(otu.mat)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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