View source: R/taxa_data_table.R
taxa.data.table | R Documentation |
Extract tax_table from a phyloseq object and turn it into a data.table
taxa.data.table(ps, taxon.column.name = "Taxon")
ps |
a phyloseq object |
taxon.column.name |
the name of the column to keep taxon names (because data.table doesn't use row names). Defaults to "Taxon". Can set to FALSE to drop sample names. |
data.table
, phyloseq
, otu_table
data(example_phyloseq) taxa.DT <- taxa.data.table(example_phyloseq) taxa.DT
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