Files in kstagaman/sharpton-lab-metaGTx.processing
Sharpton Lab Metagenomic & Metatranscriptomic Processing

.gitignore

CopyOftemplate.R

DESCRIPTION

NAMESPACE

R/create_processing_env.R R/data.R R/execute_commands.R R/extract_metaphlan2_files.R R/generage_SGE_command.R R/generate_full_commands.R R/generate_template.R R/generate_tool_command.R R/get_pct_unalign.R R/helper_functions.R R/install_chocophlan.R R/join_metaphlan2_tables.R R/join_unpacked_pathways_tables.R R/symlink_files.R R/symlink_raw_fastqs.R README.md

data/template_code.RData

generate_template_data.R man/create.processing.env.Rd man/execute.commands.Rd man/extract.metaphlan2.files.Rd man/generate.SGE.command.Rd man/generate.full.commands.Rd man/generate.template.Rd man/generate.tool.command.Rd man/get.pct.unalign.Rd man/helper.functions.Rd man/install.chocophlan.Rd man/join.metaphlan2.tables.Rd man/join.unpacked.pathways.tables.Rd man/symlink.files.Rd man/symlink.raw.fastqs.Rd man/template.code.Rd

metaGTx.processing.Rproj

kstagaman/sharpton-lab-metaGTx.processing documentation built on Oct. 2, 2022, 4:39 p.m.

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