ks.vulcano_plot: ks.vulcano_plot

In kstawiski/miRNAselector: miRNAselector - a package for biomarker selection based on high-throughput experiments.

Description

Draw vulcano plot of selected miRNAs.

Usage

ks.vulcano_plot(
  selected_miRNAs,
  DE = ks.miRNA_differential_expression(),
  only_label = NULL,
  take_adjusted_p = FALSE
)

Arguments

selected_miRNAs	Vector of selected miRNAs.
DE	Differential expression to get the values from. It can be generated by 'ks.miRNA_differential_expression()' or 'ks.best_signature_de()'
only_label	If NULL - all selected miRNAs will be labeled. If you want to label only selected miRNAs provide a character vector with their names.
take_adjusted_p	If take adjusted p-value using BH method. Default: false

Value

Vulcano plot.

kstawiski/miRNAselector documentation built on Oct. 10, 2020, 9:03 a.m.