ks.merge_formulas: ks.merge_formulas

In kstawiski/miRNAselector: miRNAselector - a package for biomarker selection based on high-throughput experiments.

Description

Merge and filter formulas. This function can be used to merge the formulas*.RDS created by different runs of 'ks.miRNAselector()' and filter them to keep the maximum number of miRNAs. This may be useful in planning qPCR validation. The result of this function is 'featureselection_formulas_final.RDS' file, which can be futher supplied to 'ks.benchmark()'.

Usage

ks.merge_formulas(wd = getwd(), max_miRNAs = 11, add = list())

Arguments

wd	Working directory with formulas*.RDS files.
max_miRNAs	Maximum number of miRNAs to be selected in formulas.
add	List of additional sets that should be added to the formulas.

Value

Final formulas object, also save as 'featureselection_formulas_final.RDS' in working directory.

kstawiski/miRNAselector documentation built on Oct. 10, 2020, 9:03 a.m.