adjustDirectoryInstructions: Adjust default instructions

In kueckelj/SPATA2: A Toolbox for Spatial Gene Expression Analysis

Adjust default instructions

Description

Adjust default instructions

Usage

adjustDirectoryInstructions(object, to, directory_new, combine_with_wd = FALSE)

Arguments

object	A valid spata-object.
to	Character value. Denotes the platform for which a new storage directory is to be created. Must be either 'cell_data_set', 'seurat_object' or 'spata_object'.
directory_new	Character value. The new directory under which to store the object of interest. Overwrites the stored default directory. Use getDefaultDirectory() to obtain the current set up.
combine_with_wd	Character value or FALSE. If specified with a character value (default: '/') the input of new_directory is considered to be a relative directory and is combined with the current working directory (base::getwd()) separated with the character string specified. If set to FALSE the input of new_directory is taken as is.
...	Named arguments whoose default input you want to override.

Value

An updated spata object.

kueckelj/SPATA2 documentation built on March 16, 2024, 10:25 a.m.