R/mystar.R

In kuppal2/xmsPANDA: R Package for Biomarker Discovery, Network, and Data Exploratory Analysis

mystar <-
function(coords, v=NULL, params) {
  vertex.color <- params("vertex", "color")
  if (length(vertex.color) != 1 && !is.null(v)) {
    vertex.color <- vertex.color[v]
  }
  vertex.size  <- 1/200 * params("vertex", "size")
  if (length(vertex.size) != 1 && !is.null(v)) {
    vertex.size <- vertex.size[v]
  }
  norays <- params("vertex", "norays")
  if (length(norays) != 1 && !is.null(v)) {
    norays <- norays[v]
  }
  
  mapply(coords[,1], coords[,2], vertex.color, vertex.size, norays,
         FUN=function(x, y, bg, size, nor) {
           symbols(x=x, y=y, bg=bg,
                   stars=matrix(c(size,size/2), nrow=1, ncol=nor*2),
                   add=TRUE, inches=FALSE)
         })
}