plot-MassSpectrum: Plot a mass spectrum

In kuwisdelu/MSExample: An example R package for mass spectrometry

Description

Plots one or two mass spectra.

Usage

## S4 method for signature 'MassSpectrum,missing'
plot(x, xlab = expression(italic(m/z)),
  ylab = expression(italic(Intensity)), type = if (isCentroided(x)) "h"
  else "l", col = "darkcyan", peaklabels = 10, add = FALSE, ...)

## S4 method for signature 'MassSpectrum,MassSpectrum'
plot(x, y,
  xlab = expression(italic(m/z)), ylab = expression(italic(Intensity)),
  type = if (isCentroided(x)) "h" else "l", col = c("darkcyan",
  "darkred"), peaklabels = 10, add = FALSE, ...)

Arguments

x	A mass spectrum to plot
xlab	x-axis label
ylab	y-axis label
type	The type of plot to draw
col	The plot color
peaklabels	Number of peaks to label
add	Add to an existing plot?
...	Arguments passed to plot function
y	A second mass spectrum to plot

kuwisdelu/MSExample documentation built on May 13, 2020, 10:25 p.m.