find_rts2: Finds Reproductive Numbers.

Description Usage Arguments Value

Description

Using data and specified serial interval, finds the effective reproductive number. The default serial interval uses an estimate for the United States on the weekly time scale. Only requires a list of cases and not the entire dataframe for the data.

Usage

1
find_rts2(cases, si_shape = 1.47, si_rate = 0.04529, k = 100)

Arguments

cases

List of cases to be used for estimating reproductive numbers.

si_shape

Shape parameter for serial interval.

si_rate

Rate parameter for serial interval.

k

Maximum length of serial interval.

Value

List of effective reproductive numbers and corresponding week numbers.


kyamkovoy/RepNumEst documentation built on May 27, 2019, 2:07 p.m.