Description Usage Arguments Value
Using data and specified serial interval, finds the effective reproductive number. The default serial interval uses an estimate for the United States on the weekly time scale. Only requires a list of cases and not the entire dataframe for the data.
1 | find_rts2(cases, si_shape = 1.47, si_rate = 0.04529, k = 100)
|
cases |
List of cases to be used for estimating reproductive numbers. |
si_shape |
Shape parameter for serial interval. |
si_rate |
Rate parameter for serial interval. |
k |
Maximum length of serial interval. |
List of effective reproductive numbers and corresponding week numbers.
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