get_rts: Finds Reproductive Numbers

Description Usage Arguments Value Warning

Description

Finds reproductive numbers based on number of individuals infected at each time point. Reweighs the si_weights by number infected.

Usage

1
get_rts(data, si_weights)

Arguments

data

Dataframe to be used for predicting reproductive number.

si_weights

Matrix of probabilities of infection based on SI. Output from get_si_weights.

Value

List of effective reproductive numbers based on the time list passed into get_si_weights.

Warning

Data must contain 'cases' column.


kyamkovoy/RepNumEst documentation built on May 27, 2019, 2:07 p.m.