Files in kylebittinger/qiimer
Work with QIIME Output Files in R
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/alpha_diversity.R
R/biom.R
R/blast.R
R/distance_matrix.R
R/otu_mapping.R
R/otu_table.R
R/qiimer.R
R/sample_mapping.R
README.md
cran-comments.md
data/relmbeta.rda
data/relmbeta_alpha.rda
data/relmbeta_assignments.rda
data/relmbeta_biom.rda
data/relmbeta_counts.rda
data/relmbeta_dist.rda
inst/testdata/blast_table.txt
inst/testdata/distmat.txt
inst/testdata/observed_species.txt
inst/testdata/otu_mapping.txt
inst/testdata/otu_table.txt
inst/testdata/otu_table_dense.biom
inst/testdata/otu_table_sparse.biom
inst/testdata/sample_map.txt
inst/tests/test_alpha_diversity.R
inst/tests/test_biom.R
inst/tests/test_blast.R
inst/tests/test_distance_matrix.R
inst/tests/test_otu_mapping.R
inst/tests/test_otu_table.R
inst/tests/test_sample_mapping.R
man/biom_raw_data.Rd
man/biom_taxonomy.Rd
man/dist_get.Rd
man/dist_groups.Rd
man/dist_subset.Rd
man/make_otu_table.Rd
man/otu_heatmap.Rd
man/qiimer.Rd
man/rarefaction_stats.Rd
man/read_blast_table.Rd
man/read_qiime_distmat.Rd
man/read_qiime_mapping_file.Rd
man/read_qiime_otu_mapping.Rd
man/read_qiime_otu_table.Rd
man/read_qiime_rarefaction.Rd
man/relmbeta.Rd
man/relmbeta_alpha.Rd
man/relmbeta_assignments.Rd
man/relmbeta_biom.Rd
man/relmbeta_counts.Rd
man/relmbeta_dist.Rd
man/saturated_rainbow.Rd
man/simplify_assignments.Rd
man/split_assignments.Rd
man/taxonomic_ranks.Rd
tests/run-all.R
