split_assignments: Split taxonomic assignment strings

In kylebittinger/qiimer: Work with QIIME Output Files in R

Description

Split taxonomic assignment strings

Usage

split_assignments(assignments, ranks = taxonomic_ranks, split = "; ", ...)

Arguments

assignments	Character vector of taxonomic assignments.
ranks	Character vector of taxonomic ranks, used as column names in the resultant data frame.
split	Pattern on which to split taxa in assignment strings.
...	Additional parameters are passed to the strsplit function.

Value

A data frame of taxonomic assignments.

See Also

taxonomic_ranks

Examples

data(relmbeta_assignments)
a <- split_assignments(relmbeta_assignments)
head(a)

kylebittinger/qiimer documentation built on May 20, 2019, 7:30 p.m.