SurvivalCalc removes nogrowth, contaminates and unexpected growth from experiments and then passes the modified results to both survivalIntegral and survivalPercentage for calculations, followed by statsCLS for statistics.
1 2 3 4 5 6 7 | SurvivalCalc(
firstDay = 1,
resultspath = getwd(),
rmflagged = TRUE,
statsCLS = TRUE,
measureInterval = 15
)
|
firstDay |
Specify the first day of measurements, default=1 |
resultspath |
System path where the results are stored, default=current directory |
rmflagged |
This determines if flagged wells are removed from CLS statistics, default=TRUE |
statsCLS |
Should the code run statsCLS on the CLS results (TRUE/FALSE), default=TRUE |
measureInterval |
Interval in minutes for each OD measurement, default=15 |
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