SurvivalPercentage: SurvivalPercentage
In labmccormick/SPOCK: Analysis yeast density over time to determine growth and survival data
Description
This function computes percentage of cells still alive. This function looks for files
that have the filename of the syntax <experiment>_Day_###.csv , where <experiment> can be
any unique ID to define the experiment, _Day_ is a marker to identify when the day is
going to be specified and ### is the actual day that growth rate measurements were started.
Usage
1
SurvivalPercentage(RAWpath = getwd(), firstDay = 1, measureInterval = 15)
Arguments
RAWpath
path where the raw data files are located. Default = current working directory
firstDay
First day of measurements. Default = 1
measureInterval
Time between each OD measurement in minutes. Default = 15
labmccormick/SPOCK documentation built on May 25, 2021, 5:25 p.m.
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Description
This function computes percentage of cells still alive. This function looks for files that have the filename of the syntax <experiment>_Day_###.csv , where <experiment> can be any unique ID to define the experiment, _Day_ is a marker to identify when the day is going to be specified and ### is the actual day that growth rate measurements were started.
Usage
1 | SurvivalPercentage(RAWpath = getwd(), firstDay = 1, measureInterval = 15)
|
Arguments
RAWpath |
path where the raw data files are located. Default = current working directory |
firstDay |
First day of measurements. Default = 1 |
measureInterval |
Time between each OD measurement in minutes. Default = 15 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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